The potential of phosphate solubilizing microorganisms (PSM) isolated from different ecosystems on calcareous soils in Timor Island, Indonesia
DOI:
https://doi.org/10.15243/jdmlm.2025.123.7803Keywords:
calcareous soil, PSM, phosphorous, potential isolateAbstract
The study was conducted in three different ecosystems: mamar (a typical local ecosystem close to water catchment areas), farm, and coastal ecosystems. In each ecosystem, soil samples were taken from the rhizosphere of five different plants to investigate the occurrence of PSM, molecularly identify the potential isolates, and evaluate their ability to increase soil phosphorus (P) availability and mungbean yield. The highest population of phosphate-solubilizing bacteria (PSB) was found in the mamar ecosystem. Phosphate-solubilizing fungi were only found in the farm and coastal ecosystems, with low populations, and restricted to the rhizosphere of a few plants. The number of PSB isolates was higher in the coastal ecosystem, followed by the farm and mamar ecosystems. The phosphate solubilizing index of the isolate was quite high, ranging from 210 to 300. One isolate from the five molecularly selected isolates from Kupang regency was identified as Aspergillus sp. (cassava rhizosphere origin), one isolate from the farm ecosystem (Moringa rhizosphere origin), and three isolates from the coastal ecosystem (Jatropha gossypiifolioa, Scheichera oleosa and Calotropis gigantea L. rhizosphere origin) were all identified as Pseudomonas sp. Two selected isolates from a previous study in Timor Tengah Selatan regency, collected from the mamar ecosystem (bamboo and Leuchaena leucocephala rhizosphere), were both identified as Acinetobacter baumannii. Inoculation of PSB resulted in higher available soil P compared to the uninoculated treatment. PSB inoculation also provided higher tissue P than the uninoculated treatment. PSB from coastal areas gave the highest pod weight and seed weight compared to other inoculation treatments.
References
Alori, E.T., Glick, B.R. and Babalola, O.O. 2017. Microbial phosphorus solubilization and its potential for use in sustainable agriculture. Frontiers in Microbiology 8. https://doi.org/10.3389/fmicb.2017.00971
Asril, M. and Lisafitri Y. 2019. Amount of soil phosphate solubilizing bacteria in the reservoir of ITERA and its environmental conditions. IOP Conference Series: Earth Environmental Sciences 258. https://doi.org/10.1088/1755-1315/258/1/01202
Bhodiwal, S. and Barupal, T. 2022. Phosphate solubilizing microbes: an incredible role for plant supplements. MOJ Ecology and Environmental Sciences 7(5):170-172. https://doi.org/10.15406/mojes.2022.07.00263
BPS NTT Province. 2023. The average of rainfall in NTT (in Indonesian).
Chen, W., Yang, F., Zhang, L. And Wang, J. 2016. Organic acid secretion and phosphate solubilizing efficiency of Pseudomonas sp. PSB12: Effects of phosphorus forms and carbon sources. Geomicrobiology Journal 33(10):870-877. https://doi.org/10.1080/01490451.2015.1123329
Denardine, L.G.O., Alves, L.A., Ortigara, C., Winck, B., Coblinski, J.A., Schmidt, M.R., Carlos, F.S., Gama de Toni, C.A., Camargo, F.A.O., Anghinoni, I. and Clay, D. 2020. How different soil moisture levels affect the microbial activity. Ciencia Rural 50(6). https://doi.org/10.1590/0103-8478cr20190831
Dewanti, A.W., Pratiwi, E. and Nuraini, Y. 2016. Viability and activity of phosphatase enzymes and organic acid production of phosphate solubilizing bacteria at several storage temperatures. Jurnal Tanah dan Sumberdaya Lahan 3(1):311-318 (in Indonesian).
Ding, Y., Yi, Z., Fang, Y., He, S.,Li,Y., He, K., Zhao, H. and Jin Y. 2021. Multi-omics reveal the efficient of phosphate – solubilizing mechanism of bacteria on rocky soil. Frontiers in Microcbiology 12:761972. https://doi.org/10.3389/fmicb.2021.761972
Ekowati, C.N., Shintia, R., Umar, S. and Irawan, B. 2022. Potential of soil bacterial isolates from Liwa Botanical Farms in West Lampung as phosphate solubilizing bacteria. Jurnal Biologi Eksperimen dan Keanekaragaman Hayati 9(1):83-89. https://doi.org/10.23960/jbekh.v9i1.203 (in Indonesian).
Gaind, S. 2016. Phosphate dissolving fungi: Mechanism and application in alleviation of salt stress in wheat. Microbiological Research 193:94-102. https://doi.org/10.1016/j.micres.2016.09.005
Indonesian Centre for Agricultural Land Resources Research and Development. 2009. Chemical Analysis of Soil, Plant, Water and Fertilizer. Indonesian Agency for Agricultural Research and Development, Jakarta (in Indonesian).
Ingle, K.P. and Padole, D.A. 2017. Phosphate solubilizing microbes: An overview. International Journal of Current Microbiology and Applied Sciences 6(1):844-852. https://doi.org/10.20546/ijcmas.2017.601.099
Janati, W., Bouabid, R., Mikou, K., Ghadraoui, L.E. and Errachidi, F. 2023. Phosphate solubilizing bacteria from soils with varying environmental conditions: Occurrence and function. PLoS ONE 18(12):e0289127. https://doi.org/10.1371/journal.pone.0289127
Kalayu, G. 2019. Phosphate solubilizing microorganisms: Promising approach as biofertilizers. International Journal of Agronomy. https://doi.org/10.1155/2019/4917256
Karpagam, T. and Nagalakshmi, P.K. 2014. Isolation and characterization of phosphate solubilizing microbes from agricultural soil. International Journal of Current Microbiology and Applied Sciences 3(3):601-614.
Kaur, G. and Reddy, M.S. 2017. Improvement of crop yield by phosphate-solubilizing Aspergillus species in organic farming. Archived Agronomy and Soil Sciences 63(1):24-34. https://doi.org/10.1080/03650340.2016.1182161
Khan, H., Akbar, W.A., Shah, Z., Rahim, H.U., Taj, A. and Alatalo, J.M. 2022. Coupling phosphate-solubilizing bacteria (PSB) with inorganic phosphorus fertilizer improves mungbean (Vigna radiata) phosphorus acquisition, nitrogen fixation, and yield in alkaline-calcareous soil. Heliyon 8(3). https://doi.org/10.1016/j.heliyon.2022.e09081
Larasati, E.D., Rukmi, M.G.I., Kusdiyanti, E. and Ginting, R.C.B. 2108. Isolation and identification of phosphate solubilizing bacteria from peat soil. Bioma 20(1):1-8. https://doi.org/10.14710/bioma.20.1.1-8.
Mohamed, E.A.H., Farag, A.G. and Youssef, S.A. 2018. Phosphate solubilization by Bacillus subtilis and Serratia marcescens isolated from tomato plant rhizosphere. Journal of Environmental Protection 9:266-277. https://doi.org/10.4236/jep.2018.93018
Mussarat, J. and Khan, M.S. 2014. Factors affecting phosphate-solubilizing activity of microbes: Current status. In: Khan MS, Zaidi A, Mussarat J (eds). Phosphate Solubilizing Microorganisms. Springer, Cham, New York. https://doi.org/10.1007/978-3-319-08216-5_3
Ngongo, Y., Basuki, T., deRosari, B., Hosang, E.Y., Nulik, J., daSilva, H., Hau, D.K., Sitorus, A., Kotta, N.R.E., Njurumana, G.N., Pujiono, E., Ishaq, L.F., Simamora, A.V. and Mau, Y.S. 2022. Local wisdom of west timorese farmers in land management. Sustainability 14(10):6023. https://doi.org/10.3390/su14106023
Nur, M.S.M., Benggu, Y.I., Adu Tae, S.J., Ishaq, L.F. and Soetedjo, I.N.P. 2023. Isolation and characterization of indegenous phosphate solubilizing bacteria from calcareous soil of dry land ecosystem in Timor Tengah Selatan, East Nusa Tenggara Indonesia. International Journal of Tropical Dry Lands 7(2):66-72. https://doi.org/10.13057/tropdrylands/t070202
Nur, M.S.M., Utomo, W.H., Handayanto, E., Nugroho, W.H. and Islami, T. 2014. The use of biochar fortified compost on calcareous soil of East Nusa Tenggara, Indonesia: 1. Evolution of organic matter and nitrogen on composting of farm yard manure (FYM) and Siam weed (Chromolaena odorata L.) biomass added with biochar as a bulking agent. Advances in Natural and Applied Sciences 8(8):175.
Oteino, N., Lally, R.D., Kiwanuka, S., Lloyd, A., Ryan, D., K.J., Germaine, K.J. and Dowling, D.N. 2015. Plant growth promotion induced by phosphate solubilizing endophytic Pseudomonas isolates. Frontiers in Microbiology 6:745. https://doi.org/10.3389/fmicb.2015.00745
Pande, A., Pandey, P., Mehra, S., Singh, M. and Kaushik, S. 2017. Phenotypic and genotypic characterization of phosphate solubilizing bacteria and their efficiency on the growth of maize. Journal of Genetic Engineering and Biotechnology 15(2):379-391. https://doi.org/10.1016/j.jgeb.2017.06.005
Pati, B. and Padhi, S. 2021. Isolation and characterization of phosphate solubilizing bacteria in saline soil from Coastal Region of Odisha. GSC Biological and Pharmaceutical Sciences 16(03):109-119. https://doi.org/10.30574/gscbps.2021.16.3.0273
Praeg, N., Seeber, J., Leitinger, G., Tasser, E., Newesely, C., Tappeiner, U. and Illmer, P. 2020. The role of land management and elevation in shaping soil microbial communities: Insights from the Central European Alps. Journal of Soil Biology and Biochemistry 150. https://doi.org/10.1016/j.soilbio.107951
Puay, Y., Kuang, S.M., Moata, M.R., Senawi, S. and Kusumandari, A. 2019. Prediction of soil erosion using GIS-USLE under different land uses in West Timor, Indonesia. Proceedings of the 1st International Confference Enginering, Sciences and Commerce, ICESC 2019, 18-19 October 2019, Labuan Bajo, Nusa Tenggara Timur, Indonesia. https://doi.org/10.4108/eai.18-10-2019.2290004
Rahman, K.M.A. and Zhang, D. 2018. Effects of fertilizer broadcasting on the excessive use of inorganic fertilizers and environmental sustainability. Sustainability 10(3):759. https://doi.org/10.3390/su10030759
Sharon, J.A., Hathwaik, L.T., Glenn, G.M., Imam, S.H. and Lee, C.C. 2016. Isolation of efficient phosphate solubilizing bacteria capable of enhancing tomato plant growth. Journal of Soil Sciences and Plant Nutritions 16(2):525-536. https://doi.org/10.4067/S0718-95162016005000043
Solanki, R.L., Mahendra S. and Deepa, I. 2018. Effect of phosphorous, sulphur and PSB on yield of indian mustard (Brassica juncea L) and available macronutrients in soil. Journal of The Indian Society of Soil Science 66(4):415-419. https://doi.org/10.5958/0974-0228.2018.00052.X
Sosena, A. and Sheleme, B. 2020. Effects of lime and phosphorous application on chemical properties of soil, dry matter yield, and phosphorus concentration of barley (Hordeum vulgare) grown on Nitosols of Emdibir, Southern Ethiopia. Journal of Soil Sciences and Environmental Management 11(4):131-141. https://doi.org/10.5897/JSSEM2020.0837
Steinauer, K., Chatzinotas, A. and Eisenhauer, N. 2016. Root exudate cocktails: the link between plant diversity and soil microorganisms?. Ecology and Evolution 6:7387-7396. https://doi.org/10.1002/ece3.2454
Susilowati, L.E., Kusumo, B.H. and Arifin, Z. 2019. Screening of the drought tolerant phosphate solubilizing bacteria in dissolving P-inorganic. IOP Conference Series: Journal of Physics 1402(5):055082. https://doi.org/10.1088/1742-6596/1402/5/055082
Tyagi, J., Ahmad, S. and Malik, M. 2022. Nitrogenous fertilizers: impact on environment sustainability, mitigation strategies, and challenges. International Journal of Environmental Science and Technology 19:11649-11672. https://doi.org/10.1007/s13762-022-04027-9
Vives-Peris, V., de Ollas, C., Gomez-Cadenas, A. and Peres-Clemente, R.M. 2020. Root exudates: from plant to rhizosphere and beyond. Plant Cell Reports 39:3-17. https://doi.org/10.1007/s00299-019-02447-5
Wahid, F., Fahad, S., Danish, S., Adnan, M., Yue, Z., Saud, S., Siddiqui, M.H., Brtnicky, M., Hammerschmiedt, T. and, Datta, R. 2020. Sustainable management with mycorrhizae and phosphate solubilizing bacteria for enhanced phosphorus uptake in calcareous soils. Agriculture 10(8):334. https://doi.org/10.3390/agriculture10080334
Wan, W., Qin, Y., Wu, H., Zuo, W., He, H., Tan, J., Wang, Y. and He, D. 2020. Isolation and characterisation of phosphate solubilizing bacteria with multiple phosphorous sources utilizing capability and their potensial for lead immobilization in soil. Frontier of Microbiology 11:752, 23 April 2020, Section Terrestrial Microbiology, Volume 11. https://doi.org/10.3389/fmicb.2020.00752
Wang, Y., Peng, S., Hua, Q., Qiu, C., Wu, P., Liu, X. and Lin, X. 2021. The long-term effects of using phosphate-solubilizing bacteria and photosynthetic bacteria as biofertilizers on peanut yield and soil bacteria community. Frontier of Microbiology 12. https://doi.org/10.3389/fmicb.2021.693535
Wiesmeier, M., Urbanski, L., Hobley, E., Lang, B., von Lutzow, M., Marin-Spiotta, E., van Wesemael, B., Rabot, E., Lieb, M., Garcia-Franco, N., Wollschlager, U., Vogel, H. and Kögel-Knabner, I. 2019. Soil organic carbon storage as a key function of soils - A review of drivers and indicators at various scales. Geoderma 333:149-162. https://doi.org/10.1016/j.geoderma.2018.07.026
Yasmeen, S. and Bano, A. 2014. Combined effect of phosphate-solubilizing microorganisms, Rhizobium and Enterobacter on root nodulation and physiology of soybean (Glycine max L.). Communications in Soil Science and Plant Analysis 45(18):2373-2384. https://doi.org/10.1080/00103624.2014.939192
Downloads
Submitted
Accepted
Published
How to Cite
Issue
Section
License
Copyright (c) 2025 Journal of Degraded and Mining Lands Management

This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
Submission of a manuscript implies: that the work described has not been published before (except in the form of an abstract or as part of a published lecture, or thesis) that it is not under consideration for publication elsewhere; that if and when the manuscript is accepted for publication, the authors agree to automatic transfer of the copyright to the publisher.
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
Scientific Journal by Eko Handayanto is licensed under a Creative Commons Attribution 4.0 International License.
Based on a work at https://ub.ac.id.
Permissions beyond the scope of this license may be available at https://ircmedmind.ub.ac.id/.